Search results for "Soil ecology"

showing 10 items of 19 documents

Tropical Andean forests are highly susceptible to nutrient inputs--rapid effects of experimental N and P addition to an Ecuadorian montane forest.

2012

Tropical regions are facing increasing atmospheric inputs of nutrients, which will have unknown consequences for the structure and functioning of these systems. Here, we show that Neotropical montane rainforests respond rapidly to moderate additions of N (50 kg ha -1 yr -1) and P (10 kg ha -1 yr -1). Monitoring of nutrient fluxes demonstrated that the majority of added nutrients remained in the system, in either soil or vegetation. N and P additions led to not only an increase in foliar N and P concentrations, but also altered soil microbial biomass, standing fine root biomass, stem growth, and litterfall. The different effects suggest that trees are primarily limited by P, whereas some pro…

0106 biological sciences010504 meteorology & atmospheric scienceslcsh:MedicinePlant Science01 natural sciencesPlant RootsTreesSoilNutrientGlobal Change EcologyBiomasslcsh:ScienceConservation ScienceBiomass (ecology)MultidisciplinaryEcologyEcologyPhosphorusVegetationBiodiversityPlant litterBiogeochemistrySoil EcologyPlantsTropical; Andean; Forests; Nutrient Input; N; P; Ecuadorian Montane ForestTerrestrial EnvironmentsEcuadorResearch ArticleNitrogenRainforestBiology010603 evolutionary biologyEcosystemsSystems EcologynutrientsPlant-Environment InteractionsForest ecologyEcosystemmontaneforestTerrestrial EcologyFertilizersBiologyEcosystem0105 earth and related environmental sciencesTropical ClimateChemical EcologyPlant Ecologylcsh:RTropics15. Life on landPlant Leaveslcsh:QEcological EnvironmentsPloS one
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History of land-use intensity can modify the relationship between functional complexity of the soil fauna and soil ecosystem services - A microcosm s…

2012

Abstract Agricultural intensification generally results in the loss of soil organic matter, a decline in soil biodiversity, and the reduced ability of soils to retain nutrients. Intensified land-use can bring about legacy effects in soil ecosystem services that may last for hundreds of years after the cessation of agricultural practises. We studied, in a laboratory pot experiment, whether legacy effects due to intensive land/soil management (intensively managed wheat field) can be alleviated by restoring the disturbed soil with soil fauna typical of less managed soils (grassland soil). We also compared the effects of functional complexity of the soil fauna (microfauna, microfauna + mesofaun…

0106 biological sciences2. Zero hungerEcologyEcologySoil biodiversitySoil biologySoil organic matterSoil Science04 agricultural and veterinary sciencesSoil carbon15. Life on land010603 evolutionary biology01 natural sciencesAgricultural and Biological Sciences (miscellaneous)Soil managementNo-till farmingAgronomy040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceSoil ecologyta1181Soil fertilityApplied Soil Ecology
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Priorities for research in soil ecology

2017

The ecological interactions that occur in and with soil are of consequence in many ecosystems on the planet. These interactions provide numerous essential ecosystem services, and the sustainable management of soils has attracted increasing scientific and public attention. Although soil ecology emerged as an independent field of research many decades ago, and we have gained important insights into the functioning of soils, there still are fundamental aspects that need to be better understood to ensure that the ecosystem services that soils provide are not lost and that soils can be used in a sustainable way. In this perspectives paper, we highlight some of the major knowledge gaps that shoul…

0106 biological sciencesaboveground-belowground interactionsSoil biodiversityAboveground-belowground interactionssoil processesWiskundige en Statistische Methoden - Biometris01 natural sciencesEcosystem servicesekosysteemitSoil managementMicrobial ecologyNovel environmentsSoil food webClimate changeGlobal change2. Zero hungerSoil healthbiodiversity–ecosystem functioningEcologySoil Biology04 agricultural and veterinary sciencesSoil processesPE&RCclimate changeekosysteemipalvelutGeographyBiogeographyinternationalSoil managementBiodiversity–ecosystem functioningplant-microbe interactionsSoil Sciencesoil biodiversityChemical ecologyAboveground-belowground interactions; Biodiversity–ecosystem functioning; Biogeography; Chemical ecology; Climate change; Ecosystem services; Global change; Microbial ecology; Novel environments; Plant-microbe interactions; Soil biodiversity; Soil food web; Soil management; Soil processes010603 evolutionary biologyArticleeliömaantiedesoil food webSoil governanceSoil food webSoil ecologyEcosystem servicesMathematical and Statistical Methods - BiometrisEnvironmental planningBodembiologieglobal changeEcology Evolution Behavior and Systematicsmaaperänsuojeluchemical ecology15. Life on landSoil biodiversitybiodiversiteettiekosysteemit (ekologia)mikrobiekologia13. Climate actionSustainable management040103 agronomy & agricultureta1181ilmastonmuutosnovel environments0401 agriculture forestry and fisheriessoil managementPlant-microbe interactions
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Ecological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe

2016

Soil organisms are considered drivers of soil ecosystem services (primary productivity, nutrient cycling, carbon cycling, water regulation) associated with sustainable agricultural production. Soil biodiversity was highlighted in the soil thematic strategy as a key component of soil quality. The lack of quantitative standardised data at a large scale has resulted in poor understanding of how soil biodiversity could be incorporated into legislation for the protection of soil quality. In 2011, the EcoFINDERS (FP7) project sampled 76 sites across 11 European countries, covering five biogeographical zones (Alpine, Atlantic, Boreal, Continental and Mediterranean) and three land-uses (arable, gra…

0301 basic medicineSoil biodiversityNitrogenSoil biology[SDV]Life Sciences [q-bio]DIVERSITYSoil ScienceCarbon cycling and storageWiskundige en Statistische Methoden - BiometrisNutrient cyclingARBUSCULAR MYCORRHIZAL FUNGIFOOD WEBS03 medical and health sciencesFOREST SOILCARBON SEQUESTRATIONSoil functionsSoil ecologyQUALITYMICROBIAL COMMUNITIESMathematical and Statistical Methods - BiometrisBodembiologie2. Zero hungerSoil healthEcologyEcologySoil organic matterUSE SYSTEMSPhosphorus04 agricultural and veterinary sciencesSoil carbonSoil Biology15. Life on landPE&RCAgricultural and Biological Sciences (miscellaneous)Soil qualitySoil biodiversityTERRESTRIAL ECOSYSTEMS030104 developmental biologyAgronomyinternational040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceEXTRACELLULAR ENZYME-ACTIVITIESEcosystem functionNetwork analysis
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Responses of microbial activity and decomposer organisms to contamination in microcosms containing coniferous forest soil.

2002

Soil respiration from microcosms contaminated with pentachlorophenol, 2-ethanolhexanoate, creosote, CuSO4, and benomyl was measured in order to evaluate usefulness of soil microcosms and microbial respiration rate monitoring as a toxicity test in soils with high organic matter content. Coniferous forest soil and its organisms were used as test objects. In addition, how a short-term low temperature period including frost affects respiration dynamics in stressed soils was studied, i.e., whether contaminants reduce resistance of the community to other (also natural) stresses. In addition, at the end of the experiment, effects of contaminants on faunal and microbial community structures were an…

Copper SulfatePentachlorophenolHealth Toxicology and MutagenesisSoil biologyAntidotes010501 environmental sciencescomplex mixtures01 natural sciencesTreesSoil respirationToxicity TestsSoil ecologyOrganic ChemicalsCreosoteSoil Microbiology0105 earth and related environmental sciencesEcologyHerbicidesSoil organic matterFatty AcidsPublic Health Environmental and Occupational HealthTemperature04 agricultural and veterinary sciencesGeneral Medicine15. Life on landPollutionSoil contamination6. Clean waterHumusOxygenTracheophytaEnvironmental chemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceMicrocosmEnvironmental MonitoringEcotoxicology and environmental safety
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Effects of dimethoate and benomyl on soil organisms and soil processes – a microcosm study

1998

Abstract Effects of two pesticides, dimethoate, an insecticide, and benomyl, a fungicide, applied singly or together, on soil organisms and plant growth were studied in microcosms containing agricultural soil and indigenous soil fauna together with introduced invertebrates and barley. Dimethoate reduced soil microarthropod populations and the reduction was stronger in the upper than in the lower soil layer. The collembolan community structure was affected by both pesticides. Populations of microarthropods in pesticide-treated microcosms recovered during the experiment but the community structures remained differentiated. Total numbers of enchytraeids and nematodes were not affected by eithe…

EcologySoil biodiversitySoil biologySoil organic matterfood and beveragesSoil SciencePesticideBiologyAgricultural and Biological Sciences (miscellaneous)chemistry.chemical_compoundAgronomychemistrySoil ecologySoil fertilityMicrocosmDimethoateApplied Soil Ecology
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Spatial Distribution of Fungal Communities in an Arable Soil.

2015

Fungi are prominent drivers of ecological processes in soils, so that fungal communities across different soil ecosystems have been well investigated. However, for arable soils taxonomically resolved fine-scale studies including vertical itemization of fungal communities are still missing. Here, we combined a cloning/Sanger sequencing approach of the ITS/LSU region as marker for general fungi and of the partial SSU region for arbuscular mycorrhizal fungi (AMF) to characterize the microbiome in different maize soil habitats. Four compartments were analyzed over two annual cycles 2009 and 2010: a) ploughed soil in 0-10 cm, b) rooted soil in 40-50 cm, c) root-free soil in 60-70 cm soil depth a…

Fungal StructureSoil ScienceSequence Databaseslcsh:MedicineCropsMycologyResearch and Analysis MethodsSoilDatabase and Informatics MethodsModel OrganismsPlant and Algal ModelsGrassesMolecular Biology TechniquesSequencing Techniqueslcsh:ScienceMolecular BiologySoil MicrobiologyEcologyMicrobiotaEcology and Environmental Scienceslcsh:ROrganismsFungiCorrectionBiology and Life SciencesAgricultureSoil EcologyPlantsYeastMaizeBiological DatabasesCommunity Ecologylcsh:QSequence AnalysisResearch ArticleCloningCrop ScienceCereal CropsPLoS ONE
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Microbiological analysis and metagenomic profiling of the bacterial community of an anthropogenic soil modified from typic haploxererts

2022

This work aimed to characterize the microbial communities of an anthropogenic soil originating from application of pedotechniques to Vertisols in a Mediterranean environment. Bare soil profiles were sampled at three depths (0–10 cm, 10–30 cm, and 30–50 cm) and compared with the original soil not transformed at the same depths. The anthropogenic soils were characterized by a higher CaCO3 concentration (360–640 g/kg) than control soil (190–200 g/kg), while an opposite trend was registered for clay, where control soil showed a higher concentration (465 g/kg on average) than anthropogenic soil (355 g/kg on average). Organic carbon content was much higher in the unt…

Global and Planetary ChangeEcologyAnthropogenic soilApplied soil ecologySettore AGR/14 - PedologiaMiSeq IlluminaSettore AGR/16 - MICROBIOLOGIA AGRARIAViable bacteriaanthropogenic soil; applied soil ecology; extracellular polymeric substances; MiSeq Illumina; viable bacteriacomplex mixturesextracellular polymeric substanceExtracellular polymeric substancesNature and Landscape Conservation
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Morphological determination of the phototrophic community composition of biological soil crusts in coastal sand dunes in northern Germany

2022

This dataset comprises the microbial community composition of biological soil crusts in north-German sand dunes. For this we obtained enrichment cultures of phototrophic microorganisms, by placing fragments of biocrusts of the same Petri dishes as used for sequencing, in Petri dishes with Bold Basal (1N BBM) agarized medium (Bischoff and Bold 1963). Cultures were grown under standard laboratory conditions: with a 12-hour alteration of light and dark phases and irradiation of 25 μmol photons m-2 s-1 at a temperature 20 ± 5 ºС. Microscopic study of these raw cultures began in the third week of cultivation. Morphological examinations were performed using Olympus BX53 light microscope with Noma…

Nostoc cf linckiaNodosilinea cf. epilithicaTetracystis cf. sarcinalisCylindrocystis cf crassaPtychostomum moravicumElliptochloris subsphaericaThin layer chromatographyAsterococcus spCylindrocystis cf. crassaCladonia phyllophoraChloroidium cf ellipsoideumChlorolobion sp.Hypnum cupressiforme var lacunosumHypogymnia physodesStichococcus cf. bacillarisEremochloris spCrustsParmelia sulcataStenomitos sp.algaeBracteacoccus sp.Chlorococcum spPtychostomum capillarewith Nomarski DIC opticsCladonia chlorophaeaCladonia foliaceaBiospheric SciencesMyrmecia cf irregularisField experimentNodosilinea cf epilithicaBacidina etayanaPolytrichum juniperinumCoccomyxa sp.Placynthiella uliginosaLeptolyngbya spPohlia nutansCladonia furcataPeltigera extenuataWatanabea cf. acidophilaGeosciencesChloroidium cf. ellipsoideumLongitude of eventWatanabea cf acidophilaParietochloris cf. alveolarisPtychostomum imbricatulumSiteLight microscope Olympus Ltd BX53 with Nomarski DIC opticsDicranum scopariumSyntrichia ruraliformisBX53Pseudochlorella spKlebsormidium cf flaccidumOlympus LtdCladonia novochlorophaeaDATE TIMECladonia cocciferaCladonia conistaNostoc cf. linckiaDiplosphaera chodatii16S rRNAOxyrrhynchium praelongumTetracystis cf sarcinalisChlorokybus atmophyticusNostoc sp.Interfilum cf. massjukiaeMicarea misellaCoelastrella spStenomitos spNostoc spEvent labelLecanora hageniiPolytrichum piliferumTetradesmus arenicolaElevation of eventPlanophila spChlorococcum sp.Campylopus introflexusCladonia ramulosaCephaloziella divaricataPseudochlorella sp.Nostoc cf. communeChlorolobion spNannochloris spCladonia rangiformisMacrochloris spNannochloris sp.Cladonia fimbriataEvernia prunastriCaloplaca cerinellaLecania cyrtellaLecanora persimilisCladonia subulataPseudoscleropodium purumStichococcus cf bacillarisLatitude of eventLight microscopeInterfilum terricolaCladonia glaucaCladonia portentosaPlanophila sp.Spongiochloris spCladonia reisediment analysisCladonia gracilisHypnum cupressiformeTolypothrix cf. byssoideaCeratodon purpureusEcologyCladonia uncialis ssp biuncialisPseudomuriella cf. aurantiacaCylindrocystis sp.Klebsormidium cf. subtileRacomitrium canescensMicrocoleus vaginatusCoccomyxa spCylindrocystis spLobochlamys sp.soil ecologyXanthoria parietinaCladonia ciliataHypnum cupressiforme var. lacunosumActinochloris terrestrisInterfilum cf massjukiaeNatural SciencesChlorella vulgarisMacrochloris sp.Coelastrella sp.Bracteacoccus spRacomitrium elongatumCladonia scabriusculaNostoc cf. edaphicumStichococcus allasLocationNostoc cf edaphicumKlebsormidium cf. flaccidumLophozia bicuspidataPseudomuriella cf aurantiacaKlebsormidium crenulatumduneNostoc cf communeLeptolyngbya sp.Ptilidium ciliatumCladonia macilentaMyrmecia cf. irregularisPtychostomum compactumLobochlamys spPleurozium schreberiCladonia arbusculaPhyscia tenellaBrachythecium albicansPeltigera hymeniaAmandinea punctataTimaviella sp.Scoliciosporum galluraeParietochloris cf alveolarisAsterococcus sp.Hennediella heimiiTimaviella spDATE/TIMECladonia humilisBryum capillareTolypothrix cf byssoideaKlebsormidium cf subtileEremochloris sp.Cladonia floerkeanaSpongiochloris sp.Cladonia uncialis ssp. biuncialisHypnum jutlandicum
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Do differences in chemical composition of stem and cap of Amanita muscaria fruiting bodies correlate with topsoil type?

2014

Fly agaric (Amanita muscaria) was investigated using a 1H NMR-based metabolomics approach. The caps and stems were studied separately, revealing different metabolic compositions. Additionally, multivariate data analyses of the fungal basidiomata and the type of soil were performed. Compared to the stems, A. muscaria caps exhibited higher concentrations of isoleucine, leucine, valine, alanine, aspartate, asparagine, threonine, lipids (mainly free fatty acids), choline, glycerophosphocholine (GPC), acetate, adenosine, uridine, 4-aminobutyrate, 6-hydroxynicotinate, quinolinate, UDP-carbohydrate and glycerol. Conversely, they exhibited lower concentrations of formate, fumarate, trehalose, α- an…

PhytochemistryAmanitaFungal Physiologylcsh:MedicineSoil SciencePhenylalanineMycologyPlant ScienceBiologyBiochemistryMicrobiologyAnalytical Chemistrychemistry.chemical_compoundSoilValineMicrobial PhysiologyMolecular Cell BiologyAsparagineFruiting Bodies Fungallcsh:ScienceEcosystemMicrobial MetabolismMultidisciplinaryAgaricSystems Biologylcsh:REcology and Environmental SciencesBiology and Life SciencesAgricultureCell BiologySoil Ecologybiology.organism_classificationQuinolinateTrehaloseChemistryBiochemistrychemistryPhysical Scienceslcsh:QIsoleucineAmanita muscariaResearch ArticlePloS one
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